Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BLNK ENSBTAG00000021358

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Description

B cell linker [Source:VGNC Symbol;Acc:VGNC:26506]

Location

Primary_assembly 26: 17,515,994-17,607,169 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 7 transcripts (splice variants), 198 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000072550.2	BLNK-201	1906	480aa	ENSBTAP00000060547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MXN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000056369.2	BLNK-202	1843	459aa	ENSBTAP00000051686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MDI4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076556.2	BLNK-203	1771	435aa	ENSBTAP00000072046.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NIZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085761.2	BLNK-204	1432	407aa	ENSBTAP00000070539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M9A4	-
ENSBTAT00000126832.1	BLNK-205	1114	301aa	ENSBTAP00000081048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAW7	-
ENSBTAT00000090158.1	BLNK-206	1114	301aa	ENSBTAP00000095884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TCU0	-
ENSBTAT00000132042.1	BLNK-207	400	63aa	ENSBTAP00000092765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T4N2	-

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Summary

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