Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Phenotypes
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ID History
- Gene history

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Gene: PROB1 ENSBTAG00000030520

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Description

proline rich basic protein 1 [Source:VGNC Symbol;Acc:VGNC:33357]

Location

Primary_assembly 7: 50,663,217-50,670,637 reverse strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 4 transcripts (splice variants) and 65 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000043067.5	PROB1-201	4062	1085aa	ENSBTAP00000051340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000124921.1	PROB1-203	7421	1018aa	ENSBTAP00000101848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S046	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000098472.1	PROB1-202	6539	1018aa	ENSBTAP00000076994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S046	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000108617.1	PROB1-204	3205	992aa	ENSBTAP00000077867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWQ2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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