Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LRRC15 ENSBTAG00000038600

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Description

leucine rich repeat containing 15 [Source:VGNC Symbol;Acc:VGNC:31001]

Location

Primary_assembly 1: 73,170,610-73,180,565 forward strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 3 transcripts (splice variants), 112 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110352.1	LRRC15-201	3109	697aa	ENSBTAP00000088601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000118856.1	LRRC15-203	9050	584aa	ENSBTAP00000102464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U089	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000052188.4	LRRC15-202	3054	617aa	ENSBTAP00000049967.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMI6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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