Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
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Gene: TTC38 ENSBTAG00000003017

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Description

tetratricopeptide repeat domain 38 [Source:VGNC Symbol;Acc:VGNC:36474]

Location

Primary_assembly 5: 116,576,839-116,609,079 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074170.3	TTC38-203	2928	628aa	ENSBTAP00000073598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MH81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000069657.3	TTC38-201	2701	467aa	ENSBTAP00000065721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6S8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000124666.2	TTC38-205	2666	466aa	ENSBTAP00000089281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYE8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000056392.5	TTC38-204	1508	457aa	ENSBTAP00000049933.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMR5	-
ENSBTAT00000003924.8	TTC38-202	1129	213aa	ENSBTAP00000003924.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E4R1	-

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Summary

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