Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCAR1 ENSBTAG00000033457

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Description

cell division cycle and apoptosis regulator 1 [Source:VGNC Symbol;Acc:VGNC:106671]

Location

Primary_assembly 28: 25,046,947-25,093,465 forward strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000053074.4	CCAR1-202	3938	1149aa	ENSBTAP00000049908.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q17R04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000055589.4	CCAR1-203	3905	1138aa	ENSBTAP00000050465.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJ81	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000107087.1	CCAR1-204	3893	1134aa	ENSBTAP00000085024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMA5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000098511.2	CCAR1-201	1858	568aa	ENSBTAP00000082291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIB4	-

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Summary

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