Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LTBP1 ENSBTAG00000019839

.

Description

latent transforming growth factor beta binding protein 1 [Source:VGNC Symbol;Acc:VGNC:31071]

Location

Primary_assembly 11: 15,473,810-15,930,106 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 4 transcripts (splice variants), 194 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000026435.7	LTBP1-201	6129	1708aa	ENSBTAP00000026435.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N444	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000055559.4	LTBP1-202	5844	1613aa	ENSBTAP00000049409.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MJM5	-
ENSBTAT00000085972.2	LTBP1-203	5802	1599aa	ENSBTAP00000056685.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LF45	-
ENSBTAT00000074954.3	LTBP1-204	5677	1558aa	ENSBTAP00000063636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N2U0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Summary

.

.