Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: SAP130 ENSBTAG00000006003

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Description

Sin3A associated protein 130 [Source:VGNC Symbol;Acc:VGNC:34280]

Location

Primary_assembly 2: 4,453,120-4,530,866 forward strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 5 transcripts (splice variants) and 225 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118344.2	SAP130-204	4023	1083aa	ENSBTAP00000079385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000149496.1	SAP130-201	4084	1061aa	ENSBTAP00000105738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000050755.6	SAP130-203	4015	1060aa	ENSBTAP00000047415.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZQ1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000079116.3	SAP130-202	3967	1022aa	ENSBTAP00000059474.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVU7	-
ENSBTAT00000106246.2	SAP130-205	3882	1025aa	ENSBTAP00000086289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SQQ9	-

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Summary

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