Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MTREX ENSBTAG00000010518

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Description

Mtr4 exosome RNA helicase [Source:VGNC Symbol;Acc:VGNC:34649]

Gene Synonyms

SKIV2L2

Location

Primary_assembly 20: 23,738,866-23,830,250 reverse strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000047363.5	MTREX-201	3625	1069aa	ENSBTAP00000044575.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000089650.1	MTREX-203	4311	1042aa	ENSBTAP00000084816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SPH6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000117609.1	MTREX-205	3558	951aa	ENSBTAP00000084726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHB2	-
ENSBTAT00000127242.1	MTREX-202	3427	1003aa	ENSBTAP00000086867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SS00	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000099849.1	MTREX-204	3333	993aa	ENSBTAP00000096514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJT5	-

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Summary

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