Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TPM3 ENSBTAG00000033217

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Description

tropomyosin 3 [Source:VGNC Symbol;Acc:VGNC:36253]

Location

Primary_assembly 3: 16,324,893-16,346,041 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 155 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110724.2	TPM3-205	1448	280aa	ENSBTAP00000099009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000047197.3	TPM3-202	3692	247aa	ENSBTAP00000044420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5KR47-2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000124557.2	TPM3-203	3692	247aa	ENSBTAP00000103212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TX39	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000135229.2	TPM3-201	2065	227aa	ENSBTAP00000075509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWM7	-
ENSBTAT00000112912.2	TPM3-204	1228	254aa	ENSBTAP00000077586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5Z7	-

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Summary

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