Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PROCA1 ENSBTAG00000017268

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Description

protein interacting with cyclin A1 [Source:VGNC Symbol;Acc:VGNC:33358]

Location

Primary_assembly 19: 20,130,801-20,138,349 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 6 transcripts (splice variants), 311 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000121275.1	PROCA1-202	1908	453aa	ENSBTAP00000084787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113068.1	PROCA1-206	1848	376aa	ENSBTAP00000091875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7E371	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000047094.5	PROCA1-203	1836	429aa	ENSBTAP00000044327.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZGI7	-
ENSBTAT00000070400.2	PROCA1-204	1656	369aa	ENSBTAP00000057197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LFY3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000100174.1	PROCA1-201	1626	359aa	ENSBTAP00000084885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHR5	-
ENSBTAT00000092914.1	PROCA1-205	1590	347aa	ENSBTAP00000092357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T8Y7	-

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Summary

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