Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SUPT3H ENSBTAG00000032887

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Description

SPT3 homolog, SAGA and STAGA complex component [Source:VGNC Symbol;Acc:VGNC:35479]

Location

Primary_assembly 23: 18,239,634-18,641,842 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 7 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071108.2	SUPT3H-206	1241	413aa	ENSBTAP00000071101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000112082.1	SUPT3H-205	2101	396aa	ENSBTAP00000103254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U0R3	-
ENSBTAT00000097229.1	SUPT3H-204	1457	374aa	ENSBTAP00000084592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SGY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000127791.1	SUPT3H-202	1302	345aa	ENSBTAP00000082052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SE07	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000046690.5	SUPT3H-201	1219	346aa	ENSBTAP00000043962.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLY3	-
ENSBTAT00000083911.2	SUPT3H-203	1127	325aa	ENSBTAP00000074033.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIA7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085523.3	SUPT3H-207	768	255aa	ENSBTAP00000058665.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LP47	-

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Summary

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