Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LINGO1 ENSBTAG00000023147

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Description

leucine rich repeat and Ig domain containing 1 [Source:VGNC Symbol;Acc:VGNC:30899]

Location

Primary_assembly 21: 32,763,469-32,871,529 reverse strand.

ARS-UCD2.0:CM008188.2

About this gene

This gene has 6 transcripts (splice variants), 258 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131296.1	LINGO1-205	3029	637aa	ENSBTAP00000083303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000031490.6	LINGO1-201	4020	614aa	ENSBTAP00000043683.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBT2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000127683.1	LINGO1-204	3276	614aa	ENSBTAP00000080753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBT2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000113235.1	LINGO1-202	3255	614aa	ENSBTAP00000084037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBT2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000135639.1	LINGO1-203	3178	614aa	ENSBTAP00000080137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBT2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000092319.1	LINGO1-206	2050	629aa	ENSBTAP00000095704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9THL6	-

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Summary

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