Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: RETREG3 ENSBTAG00000032493

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Description

reticulophagy regulator family member 3 [Source:VGNC Symbol;Acc:VGNC:33880]

Location

Primary_assembly 19: 42,656,792-42,677,151 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 3 transcripts (splice variants) and 107 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000046079.4	RETREG3-202	2601	466aa	ENSBTAP00000043407.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BBW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000101052.1	RETREG3-201	2387	457aa	ENSBTAP00000084810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SLL1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000073713.2	RETREG3-203	2325	369aa	ENSBTAP00000061202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LV12	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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