Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BEST1 ENSBTAG00000011186

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Description

bestrophin 1 [Source:VGNC Symbol;Acc:VGNC:26471]

Location

Primary_assembly 29: 40,467,589-40,477,419 forward strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000046067.4	BEST1-203	3743	589aa	ENSBTAP00000043395.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A4I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000093278.2	BEST1-201	2760	585aa	ENSBTAP00000074997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RT77	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000147715.1	BEST1-202	2679	558aa	ENSBTAP00000107651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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