Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TNFSF12 ENSBTAG00000031725

.

Description

TNF superfamily member 12 [Source:VGNC Symbol;Acc:VGNC:55878]

Location

Primary_assembly 19: 27,282,474-27,291,150 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants), 83 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000090176.1	TNFSF12-201	1489	266aa	ENSBTAP00000085432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SGW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000126286.1	TNFSF12-202	1429	249aa	ENSBTAP00000085995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIC9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000045584.6	TNFSF12-203	1297	231aa	ENSBTAP00000042963.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MX43	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000126891.2	TNFSF12-204	524	141aa	ENSBTAP00000100983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWL0	-
ENSBTAT00000127943.2	TNFSF12-205	482	126aa	ENSBTAP00000087747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SUC3	-

.

Summary

.

.