Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: APTX ENSBTAG00000013947

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Description

aprataxin [Source:VGNC Symbol;Acc:VGNC:26043]

Location

Primary_assembly 8: 74,748,494-74,764,924 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108797.1	APTX-202	1180	351aa	ENSBTAP00000090514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T279	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000112226.1	APTX-201	2430	297aa	ENSBTAP00000093452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3S3	-
ENSBTAT00000018534.6	APTX-204	1487	275aa	ENSBTAP00000018534.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R505	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000088701.1	APTX-203	1205	293aa	ENSBTAP00000086662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRS6	-
ENSBTAT00000045509.5	APTX-205	1141	335aa	ENSBTAP00000042890.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVI2	-

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Summary

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