Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAF8 ENSBTAG00000031917

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Description

SR-related CTD associated factor 8 [Source:VGNC Symbol;Acc:VGNC:52823]

Location

Primary_assembly 9: 91,411,755-91,605,839 forward strand.

ARS-UCD2.0:CM008176.2

About this gene

This gene has 5 transcripts (splice variants), 189 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000127896.2	SCAF8-201	5790	1484aa	ENSBTAP00000091481.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6R9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000074669.3	SCAF8-202	5072	1264aa	ENSBTAP00000060963.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZ51	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000069259.3	SCAF8-205	5020	1278aa	ENSBTAP00000072925.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MSD5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000068799.3	SCAF8-204	4961	1186aa	ENSBTAP00000069192.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MDZ6	-
ENSBTAT00000045257.6	SCAF8-203	4420	1249aa	ENSBTAP00000042661.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYK6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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