Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP11A ENSBTAG00000000446

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Description

ATPase phospholipid transporting 11A [Source:VGNC Symbol;Acc:VGNC:26274]

Location

Primary_assembly 12: 86,287,997-86,392,480 forward strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 5 transcripts (splice variants), 279 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000086293.3	ATP11A-201	4310	1187aa	ENSBTAP00000070729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M9T8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000045151.6	ATP11A-205	7028	1154aa	ENSBTAP00000042566.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N0J3	-
ENSBTAT00000085751.3	ATP11A-204	6846	1140aa	ENSBTAP00000067508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M288	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000088339.1	ATP11A-202	4701	1166aa	ENSBTAP00000078570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S8T5	-
ENSBTAT00000081748.3	ATP11A-203	4587	1128aa	ENSBTAP00000068761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCZ4	-

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Summary

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