Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCMTD2 ENSBTAG00000031715

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Description

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:NCBI gene (formerly Entrezgene);Acc:505807]

Gene Synonyms

C20orf36, PCMTD1

Location

Primary_assembly 13: 53,650,816-53,669,782 reverse strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 4 transcripts (splice variants), 231 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000123466.1	PCMTD2-204	3881	440aa	ENSBTAP00000081065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S548	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000102653.1	PCMTD2-203	3755	398aa	ENSBTAP00000088743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXE1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000044968.5	PCMTD2-202	3677	372aa	ENSBTAP00000042405.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJB9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000133776.1	PCMTD2-201	2995	211aa	ENSBTAP00000076251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RTG2	-

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Summary

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