Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Phenotypes
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Gene: C16H1orf174 ENSBTAG00000024520

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Description

chromosome 16 C1orf174 homolog [Source:VGNC Symbol;Acc:VGNC:52643]

Location

Primary_assembly 16: 49,204,810-49,211,521 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants) and 142 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000044812.3	C16H1orf174-202	1646	320aa	ENSBTAP00000042269.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DKA0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000092108.1	C16H1orf174-203	1388	234aa	ENSBTAP00000078450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5D8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000129865.1	C16H1orf174-201	1335	282aa	ENSBTAP00000103390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TYG2	-
ENSBTAT00000115401.1	C16H1orf174-204	1156	223aa	ENSBTAP00000089078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRR7	-

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Summary

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