Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: CDRT4 ENSBTAG00000031084

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Description

CMT1A duplicated region transcript 4 [Source:VGNC Symbol;Acc:VGNC:55795]

Location

Primary_assembly 19: 32,922,176-32,946,876 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 6 transcripts (splice variants) and 81 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078666.2	CDRT4-201	667	204aa	ENSBTAP00000068735.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000090137.1	CDRT4-202	2000	198aa	ENSBTAP00000102221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXL8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000123219.1	CDRT4-203	1761	198aa	ENSBTAP00000103667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TXL8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000130096.1	CDRT4-206	781	152aa	ENSBTAP00000092545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T426	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000044000.5	CDRT4-205	779	173aa	ENSBTAP00000041523.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MKW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000095984.1	CDRT4-204	730	174aa	ENSBTAP00000098453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQ04	-

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Summary

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