Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SEMA6A ENSBTAG00000020489

.

Description

semaphorin 6A [Source:VGNC Symbol;Acc:VGNC:34441]

Location

Primary_assembly 7: 37,317,019-37,448,267 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 3 transcripts (splice variants), 216 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117043.2	SEMA6A-201	6842	1046aa	ENSBTAP00000082048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000043906.5	SEMA6A-202	6791	1029aa	ENSBTAP00000041442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BP81	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000086738.3	SEMA6A-203	6589	977aa	ENSBTAP00000060020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKD9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

.

Summary

.

.