Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Gene: KTN1 ENSBTAG00000017713

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Description

kinectin 1 [Source:VGNC Symbol;Acc:VGNC:30756]

Location

Primary_assembly 10: 68,006,328-68,119,073 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 10 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000120578.2	KTN1-210	4919	1357aa	ENSBTAP00000082769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000069650.3	KTN1-204	4907	1329aa	ENSBTAP00000064758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVS2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000108866.2	KTN1-209	4847	1333aa	ENSBTAP00000089693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZY7	-
ENSBTAT00000043690.6	KTN1-208	4839	1328aa	ENSBTAP00000041243.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLU7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000124267.2	KTN1-203	4838	1306aa	ENSBTAP00000085576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNV3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000103204.2	KTN1-202	4817	1299aa	ENSBTAP00000087391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SW07	-
ENSBTAT00000090599.2	KTN1-205	4730	1270aa	ENSBTAP00000090398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SVA3	-
ENSBTAT00000084880.3	KTN1-206	4542	1304aa	ENSBTAP00000063945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M2E2	-
ENSBTAT00000105189.1	KTN1-207	4519	1302aa	ENSBTAP00000085587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SRI4	-
ENSBTAT00000066733.3	KTN1-201	4360	1306aa	ENSBTAP00000061432.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVJ8	-

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Summary

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