Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NHSL3 ENSBTAG00000018062

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Description

NHS like 3 [Source:VGNC Symbol;Acc:VGNC:30570]

Gene Synonyms

KIAA1522

Location

Primary_assembly 2: 120,882,699-120,909,883 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 162 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074403.2	NHSL3-203	4434	1077aa	ENSBTAP00000060583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MXQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000082291.2	NHSL3-201	4407	1013aa	ENSBTAP00000072233.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKW7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000063688.3	NHSL3-202	4327	1029aa	ENSBTAP00000056294.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N322	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000043303.5	NHSL3-204	3404	1022aa	ENSBTAP00000040882.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BLV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000103580.1	NHSL3-205	764	142aa	ENSBTAP00000080429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S3C0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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