Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: POMGNT1 ENSBTAG00000013322

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Description

protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:VGNC Symbol;Acc:VGNC:55660]

Location

Primary_assembly 3: 99,869,871-99,893,600 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 7 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000149850.1	POMGNT1-206	2771	678aa	ENSBTAP00000104122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000017718.4	POMGNT1-201	2809	660aa	ENSBTAP00000017718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3T015	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000083947.2	POMGNT1-202	2740	637aa	ENSBTAP00000067559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MF72	-
ENSBTAT00000127455.1	POMGNT1-203	2725	632aa	ENSBTAP00000100160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TSX3	-
ENSBTAT00000102160.1	POMGNT1-204	2710	627aa	ENSBTAP00000077627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S2V9	-
ENSBTAT00000071488.2	POMGNT1-205	2695	622aa	ENSBTAP00000058221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMT5	-
ENSBTAT00000043096.4	POMGNT1-207	2661	640aa	ENSBTAP00000040690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QJC0	-

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Summary

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