Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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ID History
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Gene: ECSCR ENSBTAG00000030518

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Description

endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:VGNC Symbol;Acc:VGNC:108982]

Location

Primary_assembly 7: 50,720,940-50,729,483 reverse strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 4 transcripts (splice variants) and 92 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000084149.2	ECSCR-201	1547	340aa	ENSBTAP00000057350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LG62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073615.2	ECSCR-202	1442	305aa	ENSBTAP00000067419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MA10	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076446.2	ECSCR-203	1147	257aa	ENSBTAP00000071037.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000043062.3	ECSCR-204	753	229aa	ENSBTAP00000040657.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ86	-

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Summary

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