Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
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Phenotypes
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Molecular interactions
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Gene: ZC3H14 ENSBTAG00000030453

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Description

zinc finger CCCH-type containing 14 [Source:VGNC Symbol;Acc:VGNC:37102]

Location

Primary_assembly 10: 100,258,222-100,300,816 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000042987.5	ZC3H14-201	3719	799aa	ENSBTAP00000040588.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N565	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000086942.2	ZC3H14-202	3527	735aa	ENSBTAP00000064177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3ZC82-1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000071203.3	ZC3H14-203	3419	699aa	ENSBTAP00000074037.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NMZ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000042986.5	ZC3H14-204	2163	720aa	ENSBTAP00000040586.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N567	-
ENSBTAT00000088742.2	ZC3H14-205	1307	307aa	ENSBTAP00000096160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TH13	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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