Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAPPC3 ENSBTAG00000005732

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Description

trafficking protein particle complex subunit 3 [Source:VGNC Symbol;Acc:VGNC:36288]

Location

Primary_assembly 3: 109,671,169-109,691,949 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 6 transcripts (splice variants), 214 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000103781.2	TRAPPC3-203	1733	299aa	ENSBTAP00000076892.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000094021.2	TRAPPC3-201	1649	271aa	ENSBTAP00000085321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMX1	-
ENSBTAT00000079685.3	TRAPPC3-204	1558	193aa	ENSBTAP00000056911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRB3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000042784.5	TRAPPC3-205	1210	151aa	ENSBTAP00000040408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N5V9	-
ENSBTAT00000083245.3	TRAPPC3-202	1081	167aa	ENSBTAP00000073977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MU14	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000105608.2	TRAPPC3-206	979	114aa	ENSBTAP00000096402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJH9	-

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Summary

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