Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DEPDC1 ENSBTAG00000001343

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Description

DEP domain containing 1 [Source:VGNC Symbol;Acc:VGNC:55165]

Location

Primary_assembly 3: 76,768,151-76,790,284 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000040383.7	DEPDC1-201	4332	850aa	ENSBTAP00000040158.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BA57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000112444.2	DEPDC1-202	4227	815aa	ENSBTAP00000094700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9M4	-
ENSBTAT00000122738.2	DEPDC1-203	3366	528aa	ENSBTAP00000103843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1A9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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