Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2H2 ENSBTAG00000027983

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Description

ral transcription factor IIH subunit 2 [Source:UniProtKB Gene Name;Acc:A0A3Q1MYC5]

Location

Primary_assembly 20: 10,146,255-10,221,300 reverse strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 8 transcripts (splice variants), 69 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000004317.7	GTF2H2-201	5401	1453aa	ENSBTAP00000004317.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000140929.1	GTF2H2-202	5239	1399aa	ENSBTAP00000104801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000073301.2	GTF2H2-205	2496	495aa	ENSBTAP00000061028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MYC5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073943.2	GTF2H2-204	2252	415aa	ENSBTAP00000071624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MPP0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000040362.5	GTF2H2-203	2025	493aa	ENSBTAP00000040137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZE96	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083800.2	GTF2H2-206	1231	384aa	ENSBTAP00000072953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MNT2	-
ENSBTAT00000071833.2	GTF2H2-208	505	166aa	ENSBTAP00000071687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NI60	-
ENSBTAT00000125792.1	GTF2H2-207	379	123aa	ENSBTAP00000096123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGY0	-

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Summary

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