Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NFIC ENSBTAG00000008520

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Description

nuclear factor I C [Source:VGNC Symbol;Acc:VGNC:32040]

Location

Primary_assembly 7: 20,448,283-20,548,044 reverse strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 6 transcripts (splice variants), 204 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000115463.1	NFIC-206	1757	528aa	ENSBTAP00000094020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TBG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000072539.2	NFIC-201	1764	506aa	ENSBTAP00000064398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3P9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000070787.2	NFIC-204	1715	497aa	ENSBTAP00000069458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NDA1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000023727.4	NFIC-202	1616	439aa	ENSBTAP00000023727.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29RP7	-
ENSBTAT00000039403.5	NFIC-203	1530	428aa	ENSBTAP00000039197.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4ZJ65	-
ENSBTAT00000087129.2	NFIC-205	1495	406aa	ENSBTAP00000066569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N7D7	-

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Summary

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