Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC4A11 ENSBTAG00000027409

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Description

solute carrier family 4 member 11 [Source:VGNC Symbol;Acc:VGNC:34891]

Location

Primary_assembly 13: 51,975,816-51,986,666 forward strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 5 transcripts (splice variants), 251 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078155.3	SLC4A11-203	3272	922aa	ENSBTAP00000069323.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1ND00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000069050.3	SLC4A11-204	3158	884aa	ENSBTAP00000068725.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1ME28	-
ENSBTAT00000090507.2	SLC4A11-205	3143	879aa	ENSBTAP00000103981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U2T3	-
ENSBTAT00000039338.7	SLC4A11-202	2976	851aa	ENSBTAP00000039134.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MNQ5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084294.3	SLC4A11-201	2970	800aa	ENSBTAP00000059389.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJ86	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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