Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAB39L ENSBTAG00000034222

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Description

calcium binding protein 39 like [Source:VGNC Symbol;Acc:VGNC:26662]

Location

Primary_assembly 12: 18,898,030-19,012,389 reverse strand.

ARS-UCD2.0:CM008179.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000037908.6	CAB39L-204	3424	367aa	ENSBTAP00000037730.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000086657.2	CAB39L-202	3450	334aa	ENSBTAP00000060098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKH8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000080727.2	CAB39L-203	3384	312aa	ENSBTAP00000073684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHF8	-
ENSBTAT00000102007.1	CAB39L-201	1903	328aa	ENSBTAP00000075210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RTI3	-

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Summary

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