Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLA2G6 ENSBTAG00000014015

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Description

phospholipase A2 group VI [Source:VGNC Symbol;Acc:VGNC:32964]

Location

Primary_assembly 5: 109,891,655-109,950,883 reverse strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 7 transcripts (splice variants), 211 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132343.1	PLA2G6-202	3776	942aa	ENSBTAP00000095242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000067616.2	PLA2G6-201	3594	793aa	ENSBTAP00000058418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LN87	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000037697.5	PLA2G6-207	3417	866aa	ENSBTAP00000037521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BB89	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000118432.1	PLA2G6-206	3232	842aa	ENSBTAP00000092052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T880	-
ENSBTAT00000115735.1	PLA2G6-204	3227	847aa	ENSBTAP00000082278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SF92	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000069092.2	PLA2G6-203	3182	790aa	ENSBTAP00000064276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M361	-
ENSBTAT00000117756.1	PLA2G6-205	3003	744aa	ENSBTAP00000099206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRV5	-

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Summary

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