Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX29 ENSBTAG00000026371

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Description

sorting nexin 29 [Source:VGNC Symbol;Acc:VGNC:35106]

Location

Primary_assembly 25: 10,682,174-11,278,733 forward strand.

ARS-UCD2.0:CM008192.2

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000069611.3	SNX29-203	6874	817aa	ENSBTAP00000062382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N0T4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000069056.3	SNX29-205	6983	776aa	ENSBTAP00000063790.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N352	-
ENSBTAT00000037460.7	SNX29-202	3268	776aa	ENSBTAP00000037293.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MK87	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000142330.1	SNX29-204	3028	815aa	ENSBTAP00000105373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000154271.1	SNX29-201	2851	774aa	ENSBTAP00000107305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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