Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPAIN ENSBTAG00000025149

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Description

RPA interacting protein [Source:VGNC Symbol;Acc:VGNC:34097]

Location

Primary_assembly 19: 26,119,559-26,127,138 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 6 transcripts (splice variants) and 188 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000150364.1	RPAIN-205	710	231aa	ENSBTAP00000107455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000113782.2	RPAIN-201	1537	172aa	ENSBTAP00000092202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6J4	-
ENSBTAT00000035212.5	RPAIN-202	821	226aa	ENSBTAP00000035090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QAL6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000122663.1	RPAIN-203	464	148aa	ENSBTAP00000081936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEC6	-
ENSBTAT00000122151.1	RPAIN-206	338	107aa	ENSBTAP00000093137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAV0	-
ENSBTAT00000110102.1	RPAIN-204	338	106aa	ENSBTAP00000091129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3R2	-

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Summary

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