Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NHERF1 ENSBTAG00000011382

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Description

NHERF family PDZ scaffold protein 1 [Source:VGNC Symbol;Acc:VGNC:34941]

Gene Synonyms

SLC9A3R1

Location

Primary_assembly 19: 56,653,907-56,671,068 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 2 transcripts (splice variants), 279 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000034682.3	NHERF1-201	2000	368aa	ENSBTAP00000034568.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000089260.1	NHERF1-202	1940	348aa	ENSBTAP00000092041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZY2	-

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Summary

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