Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PEX1 ENSBTAG00000024431

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Description

peroxisomal biosis factor 1 [Source:VGNC Symbol;Acc:VGNC:32751]

Location

Primary_assembly 4: 9,789,227-9,870,825 reverse strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 6 transcripts (splice variants), 201 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000033872.6	PEX1-201	4451	1281aa	ENSBTAP00000033778.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000122224.1	PEX1-202	4316	1236aa	ENSBTAP00000097268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLU2	-
ENSBTAT00000069158.2	PEX1-203	4307	1233aa	ENSBTAP00000072315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NJH1	-
ENSBTAT00000108661.1	PEX1-204	4280	1224aa	ENSBTAP00000081473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S682	-
ENSBTAT00000124908.1	PEX1-206	4050	1267aa	ENSBTAP00000084020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMM4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000092621.1	PEX1-205	3485	959aa	ENSBTAP00000084043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJP9	-

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Summary

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