Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: SBSN ENSBTAG00000015915

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Description

suprabasin [Source:VGNC Symbol;Acc:VGNC:34310]

Location

Primary_assembly 18: 46,186,098-46,190,848 reverse strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 3 transcripts (splice variants) and 98 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000032236.6	SBSN-202	1923	539aa	ENSBTAP00000032173.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZB15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000115419.1	SBSN-201	1841	521aa	ENSBTAP00000080482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5K0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076897.2	SBSN-203	1815	503aa	ENSBTAP00000064793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N4M0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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