Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
- Gene history

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Gene: SCHIP1 ENSBTAG00000014960

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Description

schwannomin interacting protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:535716]

Location

Primary_assembly 1: 107,552,331-107,700,466 reverse strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 3 transcripts (splice variants) and 281 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082405.2	SCHIP1-203	2330	554aa	ENSBTAP00000058302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LHP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000031972.6	SCHIP1-202	1518	244aa	ENSBTAP00000031917.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PRG8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000077733.3	SCHIP1-201	1484	260aa	ENSBTAP00000073720.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NMB1 Q2KJB8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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