Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLOD2 ENSBTAG00000007331

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Description

procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:VGNC Symbol;Acc:VGNC:33040]

Location

Primary_assembly 1: 122,349,984-122,471,157 forward strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000031949.5	PLOD2-201	3903	762aa	ENSBTAP00000031895.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MB83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000131035.1	PLOD2-202	3726	703aa	ENSBTAP00000097717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TMY9	-
ENSBTAT00000078721.3	PLOD2-203	3495	741aa	ENSBTAP00000059826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LS34	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000080064.3	PLOD2-204	3390	706aa	ENSBTAP00000073248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MG76	-

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Summary

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