Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL12 ENSBTAG00000005077

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Description

C-X-C motif chemokine ligand 12 [Source:VGNC Symbol;Acc:VGNC:27848]

Location

Primary_assembly 28: 45,022,421-45,037,706 forward strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 2 transcripts (splice variants) and 267 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000150300.1	CXCL12-201	6351	119aa	ENSBTAP00000107229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M085	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000031279.5	CXCL12-202	1718	89aa	ENSBTAP00000031235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P5I9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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