Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NDC80 ENSBTAG00000021673

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Description

NDC80 kinetochore complex component [Source:VGNC Symbol;Acc:VGNC:31931]

Location

Primary_assembly 24: 36,860,593-36,896,274 forward strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000031047.7	NDC80-201	4482	642aa	ENSBTAP00000031011.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BF82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000111648.2	NDC80-202	4404	616aa	ENSBTAP00000096085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGC1	-
ENSBTAT00000116612.2	NDC80-203	4389	611aa	ENSBTAP00000095931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGD1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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