Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CADM3 ENSBTAG00000003217

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Description

cell adhesion molecule 3 [Source:VGNC Symbol;Acc:VGNC:26696]

Location

Primary_assembly 3: 10,531,169-10,562,139 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070841.2	CADM3-202	1616	435aa	ENSBTAP00000066094.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097499.1	CADM3-204	1757	430aa	ENSBTAP00000089776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZQ9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000129013.1	CADM3-203	1708	401aa	ENSBTAP00000102210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TUC4	-
ENSBTAT00000120460.1	CADM3-205	1685	397aa	ENSBTAP00000090540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1V6	-
ENSBTAT00000030498.4	CADM3-201	1627	374aa	ENSBTAP00000030478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q7D6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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