Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC15A3 ENSBTAG00000018366

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Description

solute carrier family 15 member 3 [Source:VGNC Symbol;Acc:VGNC:34680]

Location

Primary_assembly 29: 37,275,693-37,290,655 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 4 transcripts (splice variants), 120 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000030236.5	SLC15A3-201	1819	581aa	ENSBTAP00000030221.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000116212.1	SLC15A3-202	1743	544aa	ENSBTAP00000098724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TNV4	-
ENSBTAT00000112486.1	SLC15A3-204	1619	535aa	ENSBTAP00000102876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U139	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119769.1	SLC15A3-203	1595	527aa	ENSBTAP00000079108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5G8	-

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Summary

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