Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: SLC8B1 ENSBTAG00000011103

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Description

solute carrier family 8 member B1 [Source:VGNC Symbol;Acc:VGNC:34938]

Location

Primary_assembly 17: 61,275,017-61,316,686 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 4 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000137699.1	SLC8B1-201	2616	660aa	ENSBTAP00000106282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000029532.6	SLC8B1-203	3431	628aa	ENSBTAP00000029531.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSI3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000070502.2	SLC8B1-204	3309	577aa	ENSBTAP00000063230.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LSB1	-
ENSBTAT00000097633.1	SLC8B1-202	1210	143aa	ENSBTAP00000098056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TM44	-

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Summary

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