Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPECC1L ENSBTAG00000021656

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Description

sperm antigen with calponin homology and coiled-coil domains 1 like [Source:NCBI gene (formerly Entrezgene);Acc:519751]

Gene Synonyms

CYTSA

Location

Primary_assembly 17: 71,612,845-71,698,215 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 6 transcripts (splice variants), 229 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000085585.2	SPECC1L-204	4217	1139aa	ENSBTAP00000068592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000029400.4	SPECC1L-201	4121	1119aa	ENSBTAP00000029400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJ04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000076366.2	SPECC1L-202	4040	1092aa	ENSBTAP00000066641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCV7	-
ENSBTAT00000090819.1	SPECC1L-203	4004	1080aa	ENSBTAP00000074607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXQ9	-
ENSBTAT00000130297.1	SPECC1L-205	3872	1031aa	ENSBTAP00000082122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7W1	-
ENSBTAT00000103473.1	SPECC1L-206	3700	1037aa	ENSBTAP00000089709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZI5	-

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Summary

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