Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PARVB ENSBTAG00000021978

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Description

parvin beta [Source:VGNC Symbol;Acc:VGNC:32590]

Location

Primary_assembly 5: 114,752,494-114,868,302 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073805.3	PARVB-201	1388	367aa	ENSBTAP00000056893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000123411.2	PARVB-205	2887	327aa	ENSBTAP00000089821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2D2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000084501.3	PARVB-204	2765	346aa	ENSBTAP00000066260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M7B6	-
ENSBTAT00000115359.2	PARVB-203	1525	289aa	ENSBTAP00000079610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SBL7	-
ENSBTAT00000029307.8	PARVB-202	1382	365aa	ENSBTAP00000029307.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MC75	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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