Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NAV1 ENSBTAG00000021919

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Description

neuron navigator 1 [Source:VGNC Symbol;Acc:VGNC:59352]

Location

Primary_assembly 16: 80,635,725-80,827,839 reverse strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 4 transcripts (splice variants), 264 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132957.2	NAV1-203	7500	2099aa	ENSBTAP00000103978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000029223.8	NAV1-204	6864	1887aa	ENSBTAP00000029223.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5E5S5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000121627.1	NAV1-202	6626	1874aa	ENSBTAP00000098292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TIZ3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000087649.1	NAV1-201	5649	1482aa	ENSBTAP00000081265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCK7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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