Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCO1 ENSBTAG00000021780

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Description

synthesis of cytochrome C oxidase 1 [Source:VGNC Symbol;Acc:VGNC:34359]

Location

Primary_assembly 19: 29,646,525-29,667,789 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000111347.1	SCO1-202	3835	319aa	ENSBTAP00000101850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TU04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000029032.6	SCO1-203	3793	305aa	ENSBTAP00000029032.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A4J8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000135309.1	SCO1-204	1964	312aa	ENSBTAP00000090158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SUM4	-
ENSBTAT00000089533.1	SCO1-201	1005	310aa	ENSBTAP00000092303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6U0	-
ENSBTAT00000080952.2	SCO1-205	903	283aa	ENSBTAP00000073340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGG1	-

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Summary

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